Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922627.1_cds_XP_016471401.1_63747
CDS Infomation

[gene=LOC107793536] [db_xref=GeneID:107793536] [protein=coilin-like isoform X2] [protein_id=XP_016471401.1] [location=join(139243..139440,140249..140313,140408..140704,140795..140986,141703..141772,142123..142224,142322..142402,142486..142551,142633..142762,142971..143002,146842..146853)] [gbkey=CDS]
Sequence

ATGGGGGAGAGCGTAAGGGTTCGATTGATATTTAAGGAGCGGCACATTCTCAGCGAATTA
CAGGAGAAATCAGAGGGTCTGAGGCATAGTTGGTTCCTTCTCAAACCCCAACAGCACAGA
ACCATCTATGACCTCTCCTCTTCTGTTCTACACACTTTTCAGCTCCATCACTCTTGTCCT
CATGGCCTTCTCCTCTCTATGGATGGCTTTGTCTTGCCCCCTTTTGAATCAACTTGTATC
TTGAAGGATAATTCTATAGTCAGTGTGAAGAAGAAAGGAGGTGTTTTAGCCATTGAAGGA
AATGATACACCTAATATAGCTGAGAATATCAGAATTGTTGAGAAGCAACCAGTAAACACT
GGACAATTGCTGTTGGCGAACGAGGAGGAGTTTGACAATGAATCTGGAGGTTATGAGAGT
GAAGAGCCCGAAGATGAGTATGAAGACAAGGAAGAAGGAGCTGACCCAGTAAAACATACT
AGTGCACATCTGGAAAATGCTTTGGGTTGTAACGTGATCTCCAAGAAAAGAAAGGCATCG
GAAACACTTCCTAGCTCGAAGAAGAAGAAGCATTATTCTGAAGTTGCAGAGGAGGTTGTT
GAACAGACCAAGAAAGCTCAACAAGATCTCACAGGCAAGAAGAGTCTTTGCAAGCTAAAG
AAGGTAGCTGATCCGGATAGCAAAGATGTGGATAATAACAAAGGAAGTGCTGAAAGTAGC
AAGGTTAATGACAGCATTTGCGGCATGAAGAGAAATAACAAGTTTCAAGAGAAAGGCGTG
GAGAATGTGGAGGAAATCCCCAAGCCTGAGCGTGTTAAAAAGGGCCCTAGTAGAAGTGCT
CGGAGACAATATGCGAAAAGGCAATGGTTGCAAGAAATGATCAAAATTTACAAGCAGCAT
GCAGCTTCCGAATCAGAGGGACCTGCTAATGCTGGAAGAAGAGCTGGTAAACTGCATTCA
AAGTGGCATGTTGATGGTGAGACTGATGGCAGACCAAGGGGACGTGGGAATTGGAAGCAG
CAGCAAAATAAAGCTAAAAATCAAGAAGTGATTGGCCAACCAAAAGGACTTCTACACTGG
AAGCAATTGCGCGAAGAAGATAAGGGTAGAAATACAAACAGACAAGAGCAGACGAATGAA
AATAGCACTTTGTGTGAAAAACCAGGTCAACACAGTGATGTGGAGGATGAAGTTGTTCCA
GATCAAGCTTTGCAGCAGGATCAAGTGCAAGAGAAAATGGAGTAA

Peptide Sequence

PEP ID

XP_016471401.1
PEP Infomation

PREDICTED: coilin-like isoform X2 [Nicotiana tabacum]
Sequence

MGESVRVRLIFKERHILSELQEKSEGLRHSWFLLKPQQHRTIYDLSSSVLHTFQLHHSCP
HGLLLSMDGFVLPPFESTCILKDNSIVSVKKKGGVLAIEGNDTPNIAENIRIVEKQPVNT
GQLLLANEEEFDNESGGYESEEPEDEYEDKEEGADPVKHTSAHLENALGCNVISKKRKAS
ETLPSSKKKKHYSEVAEEVVEQTKKAQQDLTGKKSLCKLKKVADPDSKDVDNNKGSAESS
KVNDSICGMKRNNKFQEKGVENVEEIPKPERVKKGPSRSARRQYAKRQWLQEMIKIYKQH
AASESEGPANAGRRAGKLHSKWHVDGETDGRPRGRGNWKQQQNKAKNQEVIGQPKGLLHW
KQLREEDKGRNTNRQEQTNENSTLCEKPGQHSDVEDEVVPDQALQQDQVQEKME

Transcript Sequence

Gene sequence data has not been registered.